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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs35355477 chr17:62973009 C/T AMZ2P1 chr17:62962668-62971694:- 1.03 5.05 5.82E-6 Box Plot
ACC rs35378128 chr7:97472589 G/A TECPR1 chr7:97843936-97881563:- 0.7 5.28 2.53E-6 Box Plot
ACC rs35398273 chr2:99710009 GAA/G TSGA10 chr2:99613724-99771427:- 0.54 5.25 2.81E-6 Box Plot
ACC rs35424999 chr7:97402700 G/C TECPR1 chr7:97843936-97881563:- 0.72 5.44 1.45E-6 Box Plot
ACC rs35433352 chr3:46628704 AG/A TDGF1 chr3:46616024-46623953:+ 0.75 6.5 3.05E-8 Box Plot
ACC rs35444681 chr17:62991863 G/A AMZ2P1 chr17:62962668-62971694:- 0.91 5.69 5.92E-7 Box Plot
ACC rs35476284 chr16:50399888 AG/A CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot
ACC rs35500839 chr7:97406402 G/A TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs35538069 chr7:76128685 A/G UPK3B chr7:76139745-76145838:+ 0.78 7.09 3.51E-9 Box Plot
ACC rs35560136 chr16:24788915 T/A SLC5A11 chr16:24857162-24922949:+ 1.05 5.48 1.24E-6 Box Plot
ACC rs35575637 chr17:62984879 C/T AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs35580034 chr8:71572073 G/A XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs35613536 chr7:76143625 C/T POMZP3 chr7:76239303-76256578:- 0.96 8.26 4.94E-11 Box Plot
ACC rs35625408 chr17:45903351 GA/G SP6 chr17:45922274-45933240:- 0.63 5.54 1.0E-6 Box Plot
ACC rs35659635 chr7:64888700 AC/A INTS4L1 chr7:64601603-64694600:+ 0.72 5.27 2.68E-6 Box Plot